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Which means that you can live without them, and because of this, I will not discuss them. Just go with it; I will give more details in the next sections. As I said earlier, this is just an example; you could have loaded an external dataset, from a. This does not matter for what comes next. R includes a lot of functions for descriptive statistics, such as mean , sd , cov , and many more.

What dplyr brings to the table among other niceties is the possibility to apply these functions to the dataset easily. For example, imagine you want the average height of everyone in the dataset. Using the basic R functions, you could write this:. This is the same for columns of datasets as you can see. This is then given as an argument to the function mean. But what if the user wants the average height by species? Before dplyr , a solution to this simple problem would have required more than a single command.

Now this is as easy as:. Without it, one would write instead:. Imagine now that I want the average height by species, but only for masculines. Without it, one would need to write:. I think you agree with me that this is not very readable. One way to make it more readable would be to save intermediary variables:. But this can get very tedious. The result of all these operations that use dplyr functions are actually other datasets, or tibbles.

This means that you can save them in variable, and then work with these as any other datasets. You could then write this data to disk using rio::export for instance. If you need more than the mean of the height, you can keep adding as many functions as needed:.

This is quite useful, because we see that for a lot of species we only have one single individual! Since we save all the previous operations which produce a tibble in a variable, we can keep going from there:. This is good, because it forces you to look at the data to see what is going on. If you would get a number, even if there were NA s you could very easily miss these missing values. It is better for functions to fail early and often than the opposite. To test for NA , one uses the function is.

We can then rerun our analysis from before:. This dataset gives the consumption of gasoline for 18 countries from to When you load the data like this, it is a standard data. What if you would like to subset the data to focus on the year ? While filter allows you to keep or discard rows of data, select allows you to keep or discard entire columns. To keep columns:.

It looks like nothing much happened, but if you look at the second line of the output you can read the following:. It is also possible to group by more than one variable:. Ok, now that we have learned the basic verbs, we can start to do more interesting stuff. For example, one might want to compute the average gasoline consumption in each country, for the whole period:. What we get is another tibble, that contains the variable we used to group, as well as the average per country.

We can also rename this column:. For example, we can compute several descriptive statistics at once:. And then you can answer questions such as, which country has the maximum average gasoline consumption?

Because the output of dplyr verbs is a tibble, it is possible to continue working with it. This is one shortcoming of using the base summary function. The object returned by that function is not very easy to manipulate.

It is also possible to rename the column on the fly:. We can merge both gasoline and pwt by country and year, as these two variables are common to both datasets. As you see, every country and year was included, but what happened for, say, the U. This country is in pwt but not in gasoline at all:.

As you probably guessed, the variables from gasoline that are not included in pwt are filled with NA s. One could remove all these lines and only keep countries for which these variables are not NA everywhere with filter , but there is a simpler solution:.

Only countries with values in both datasets were returned. I left it as is to provide an example of a country not in pwt. Only columns of gasoline are returned, and only rows of gasoline that were matched with rows from pwt. Another important package from the tidyverse that goes hand in hand with dplyr is tidyr.

To install the development version of tidyr , use the following line:. The legacy functions, spread and gather will remain in the package but their use will be discouraged. Why wide? Because the data set will be wide, meaning, having more columns than rows. In our case, the variable colmuns has three values; var1 , var2 and var3 , and these are now the names of the new columns. As you can see, there are some missing values. This data set gives the unemployment rate for each Luxembourguish canton from to We will come back to this data later on to learn how to plot it.

Also, I needed to add a unique identifier to the data frame. If I did not add this identifier, the statement would work still:. I will come back to this later on, with another example that might be clearer. You might have noticed that because there is no data for the years and , these columns do not appear in the data. But suppose that we need to have these columns, so that a colleague from another department can fill in the values. This is possible by providing a data frame with the detailed specifications of the result data frame.

This optional data frame must have at least two columns,. You can notice that now we have columns for and too. If we remove the other columns, each row will not be uniquely identified anymore. This results in a warning message, and a tibble that contains list-columns:. In the cols argument, you need to list all the variables that need to be transformed.

Only 1 and 0 must be pivoted, so I list them. Just for illustration purposes, imagine that we would need to pivot 50 columns. It would be faster to list the columns that do not need to be pivoted. This can be achieved by listing the columns that must be excluded with - in front, and maybe using match with a regular expression:.

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